• Recipe Index
  • About Me
  • Home
  • Subscribe
menu icon
go to homepage
  • Recipe Index
  • About Me
  • Healthy Snacks
  • Desserts
  • Subscribe
subscribe
search icon
Homepage link
  • Recipe Index
  • About Me
  • Healthy Snacks
  • Desserts
  • Subscribe
×
Home » Recipes

Healthy Chocolate Muffins

Jump to Recipe - Print Recipe

Healthy Chocolate Muffins are soft, fluffy and moist. They are full of rich chocolatey flavor to satisfy those sweet tooth cravings.

Chocolate muffin on white cutting board in the foreground with additional chocolate muffins and mini chocolate chips in the background.

Healthy Chocolate Muffins...is it possible to have a rich tasting chocolate muffin that is actually healthy? The short answer is yes. So how are we making these chocolate muffins better than store bought or bakery alternatives? First, we are completely eliminating any butter or oil as these ingredients bring a lot of unhealthy fats to the muffins. Next, we are cutting back on the sugar and eliminating processed sugar altogether. We are using coconut sugar and unsweetened applesauce in place of the processed sugar that is typically in muffin recipes. The unsweetened applesauce will also help keep the muffins moist. Finally, we are using mini chocolate chips because you will get more rich chocolatey flavor in every bite using a lesser amount of chocolate than if you were using standard size chips. It's a win win if you ask me.

If you are looking for other healthy muffin recipes, try Healthy Blueberry Muffins or Carrot Raisin Muffins.

Jump to:
  • Ingredients
  • Instructions
  • Substitutions
  • Equipment
  • Storage
  • Top tip
  • FAQ
  • Related
  • Recipe

Ingredients

Ingredients for healthy chocolate muffins measured and laid out on a brown wooden surface.
  • All-Purpose Flour - I used all-purpose flour in this recipe. I haven't tried this recipe using any other type of flour.
  • Cocoa Powder - Gives the muffins that great chocolate flavor.
  • Baking soda - Helps the muffins to rise.
  • Baking Powder - Gives the muffins that fluffy cake like texture.
  • Eggs - Helps to bind all of the other ingredients together.
  • Coconut Sugar - Used to sweeten the muffins.
  • Unsweetened Applesauce - Adds to the sweetness and helps to keep the muffins moist.
  • Almond Milk- I used unsweetened almond milk for this recipe.
  • Mini Chocolate Chips - For that extra burst of chocolate flavor because who doesn't love more chocolate.

See recipe card for quantities.

Instructions

Preheat oven to 350F. Grease a muffin pan with non-stick cooking spray.

Dry ingredients in a medium white bowl with a metal whisk leaning on the side of the bowl.

Add flour, cocoa, baking soda and baking powder to a medium size bowl. Whisk to combine.

Wet ingredients in a large white bowl with a metal whisk leaning on the side of the bowl.

Add coconut sugar, eggs, unsweetened applesauce and almond milk to a large bowl. Whisk to combine.

Dry ingredients added to wet ingredients in a large white bowl.

Add dry ingredient to the wet ingredients.

Muffin batter in a large white bowl with a blue spatula leaning on the side of the bowl.

Using a spatula, gently fold the dry ingredients into the wet ingredients until the flour mixture is incorporated. Do not overmix.

Chocolate chips on top of the batter in a large white bowl.

Add chocolate chips.

Muffin batter in a large white bowl with a blue spatula leaning on the side of the bowl.

Use a spatula to fold in the chocolate chips.

Muffin batter in a blue and white silicone muffin pan.

Using a cookie scoop, divide batter evenly into prepared muffin pan.

Baked muffins in a white and blue silicone muffin pan.

Bake for 16-18 minutes or until a toothpick inserted into the center of a muffin comes out clean. Let muffins cool for 10 minutes before transferring to a wire rack to cool completely. Makes 12 muffins.

Hint: Make sure to grease the muffin pan. These muffins are low in fat so they have the tendency to stick to the pan.

Substitutions

  • Coconut Sugar - Any type of granulated sugar can be substituted for the coconut sugar.
  • Unsweetened Applesauce - You could substitute with sweetened applesauce but keep in mind the muffins will be sweeter.
  • Almond Milk - You can substitute the almond will with any type of plant based or non plant based milk.
  • Mini Chocolate Chips - Feel free to substitute regular size chocolate chips.

Equipment

Silicone Muffin Pan - I used a silicone muffin pan for this recipe because it makes it super easy to pop the muffins out of the pan. You can use a metal non-stick muffin pan but be sure to grease it liberally as the muffins tend to stick.

Cookie Scoop - I used a cookie scoop to divide the batter into the muffin pan. If you do not have a cookie scoop, feel free to use a large spoon.

Storage

Healthy Chocolate Muffins can be stored at room temperature in an airtight container or bag for up to three days.

Healthy Chocolate Muffins freeze well. Place muffins in a freezer safe container or bag and freeze up to three months. Thaw muffins at room temperature when ready to eat.

Top tip

Do not overmix the batter or the muffins will be dense. Mix the batter until all of the flour mixture has been incorporated and there are no lumps.

FAQ

Why are the muffins dry?

You have overbaked the muffins. Bake muffins for 16-18 minutes or until a toothpick inserted into the center comes out clean. I recommend checking the muffins at 16 minutes.

Why did the muffins stick to the pan?

Did you forget the grease the muffin pan? Make sure to grease the pan thoroughly as the muffins tend to stick. A silicone muffin pan works great!

What if I don't have mini chocolate chips?

No problem! You can use whatever type of chocolate chip you have on hand.

Related

Looking for other recipes like this? Try these:

  • Three pieces of healthy brownies stacked on top of one another with mini chocolate chips surrounding the brownies and a container of cocoa powder in the left background.
    Healthy Brownies
  • A bowl of cranberry sauce in the center surrounded by fresh cranberries and a metal spoon on the right side.
    Cranberry Sauce
  • Dark chocolate cranberry cookies on a black wire rack on top of a brown wooden surface.
    Dark Chocolate Cranberry Cookies
  • A baked pumpkin pie in the middle with an oven mitt on the left side and a pie lifter and pumpkin on the right side.
    Pumpkin Pie

Recipe

Chocolate muffin on white cutting board in the foreground with additional chocolate muffins and mini chocolate chips in the background.
Print Recipe
5 from 1 vote

Healthy Chocolate Muffins

Healthy Chocolate Muffins are soft, fluffy and moist. They are full of rich chocolatey flavor to satisfy those sweet tooth cravings.
Prep Time10 minutes mins
Bake Time18 minutes mins
Total Time28 minutes mins
Servings: 12 muffins
Calories: 116kcal
Author: Christine

Ingredients

  • 1 ½ cups all-purpose flour
  • ½ cup cocoa powder
  • 2 teaspoons baking soda
  • 1 teaspoon baking powder
  • 2 large eggs
  • ⅓ cup coconut sugar
  • ¼ cup unsweetened applesauce
  • 1 ¼ cup almond milk
  • ¼ cup mini chocolate chips

Instructions

  • Preheat oven to 350F. Grease a muffin pan with non-stick cooking spray.
  • Add flour, cocoa, baking soda and baking powder to a medium size bowl. Whisk to combine.
  • Add coconut sugar, eggs, unsweetened applesauce and almond milk to a large bowl. Whisk to combine.
  • Add dry ingredient to the wet ingredients.
  • Using a spatula, gently fold the dry ingredients into the wet ingredients until the flour mixture is incorporated. Do not overmix.
  • Add chocolate chips.
  • Use a spatula to fold in the chocolate chips.
  • Using a cookie scoop, divide batter evenly into prepared muffin pan.
  • Bake for 16-18 minutes or until a toothpick inserted into the center of a muffin comes out clean. Let muffins cool for 10 minutes before transferring to a wire rack to cool completely. Makes 12 muffins.

Notes

Make sure to grease the muffin pan. These muffins are low in fat so they have the tendency to stick to the pan.
Do not overmix the batter or the muffins will be dense. Mix the batter until all of the flour mixture has been incorporated and there are no lumps.
Healthy Chocolate Muffins can be stored at room temperature in an airtight container or bag for up to three days.
Healthy Chocolate Muffins freeze well. Place muffins in a freezer safe container or bag and freeze up to three months. Thaw muffins at room temperature when ready to eat.

Nutrition

Serving: 1muffin | Calories: 116kcal | Carbohydrates: 21g | Protein: 4g | Fat: 3g | Saturated Fat: 1g | Polyunsaturated Fat: 0.4g | Monounsaturated Fat: 1g | Trans Fat: 0.01g | Cholesterol: 32mg | Sodium: 276mg | Potassium: 87mg | Fiber: 2g | Sugar: 6g | Vitamin A: 55IU | Vitamin C: 0.1mg | Calcium: 67mg | Iron: 1mg

More Recipes

  • Pie crust in a glass pie plate with a rolling pin on the top left and a pie lifter on the right.
    Butter Pie Crust
  • A piece of lemon blueberry bread in the middle with part of the loaf on the right side and another piece of bread and a lemon on the top.
    Lemon Blueberry Bread
  • A strawberry scone on a white board with fresh strawberries beside the scone and other scones in the background.
    Strawberry Scones
  • A chocolate chip muffin with chocolate chips scattered around the muffin in the foreground with chocolate chips muffins and a tea towel in the background.
    Healthy Chocolate Chip Muffins
5 from 1 vote (1 rating without comment)

Leave a Reply Cancel reply

Your email address will not be published. Required fields are marked *

Recipe Rating




Hi, I'm Christine

Thanks for stopping by! Here you will find recipes from decadent to healthy and everything in between. Enjoy!

More...

Trending Recipes

  • No Bake Cookies with scattered coconut flakes on a piece or parchment paper.
    No Bake Cookies
  • A stack of three Toffee Chocolate Almond Cups and toffee bits in the foreground and more Toffee Chocolate Almond Bites in the background.
    Toffee Chocolate Almond Cups
  • A stack of butter tart squares in the foreground and uncut butter tart squares in the background.
    Butter Tart Squares
  • A Healthy Blueberry Muffin with blueberries scattered around it in the foreground and three blueberry muffins and a bowl of blueberries in the background.
    Healthy Blueberry Muffins

Footer

↑ back to top

Privacy Policy

Contact

Copyright © 2025 Seeking A Balance

Rate This Recipe

Your vote:




A rating is required
A name is required
An email is required

Recipe Ratings without Comment

Something went wrong. Please try again.